GetIntegration {enviGCMS} R Documentation

## GetIntegration was mainly used for get the intergration of certain ion's chromatogram data and plot the data

### Description

GetIntegration was mainly used for get the intergration of certain ion's chromatogram data and plot the data

### Usage

GetIntegration(
data,
rt = c(8.3, 9),
n = 5,
m = 5,
slope = c(2, 2),
baseline = 10,
noslope = T,
smoothit = T,
half = F
)


### Arguments

 data file should be a dataframe with the first column RT and second column intensity of the SIM ions. rt a rough RT range contained only one peak to get the area n points in the moving average smooth box, default value is 5 m numbers of points for regression to get the slope slope the threshold value for start/stop peak as percentage of max slope baseline numbers of the points for the baseline of the signal noslope logical, if using a horizon line to get area or not smoothit logical, if using an average smooth box or not. If using, n will be used half logical, if using the left half peak to caculate the area

### Value

intergration data such as peak area, peak hight, signal and the slope data.

### Examples

## Not run:
list <- GetIntergration(data)

## End(Not run)


[Package enviGCMS version 0.6.6 Index]