MCentropy {entropart} | R Documentation |

## Meta-Community entropy class.

### Description

Methods for objects of type "`MCentropy`

".

### Usage

```
is.MCentropy(x)
## S3 method for class 'MCentropy'
plot(x, ...)
## S3 method for class 'MCentropy'
autoplot(object, col = ggplot2::GeomCol$default_aes$fill,
border = ggplot2::GeomCol$default_aes$colour, ...)
## S3 method for class 'MCentropy'
summary(object, ...)
```

### Arguments

`x` |
An object to be tested or plotted. |

`object` |
A |

`col` |
The color used to fill the bars. See "Color Specification" in |

`border` |
The color of the borders around the bars. See |

`...` |
Additional arguments to be passed to the generic methods. |

### Value

Meta-community entropy objects are lists containing:

`MetaCommunity` |
The name of the |

`Method` |
The method used to calculate entropy ("HCDT", "Similarity-based"). |

`Type` |
The type of entropy ("alpha", "beta" or "gamma"). |

`Order` |
The order of entropy |

`Correction` |
The estimation bias correction used to calculate entropy. |

`Tree` |
The phylogenetic or functional tree used to calculate phyloentropy. |

`Normalized` |
Logical. Indicates whether phyloentropy is normalized or proportional to the height of the tree. |

`Z` |
The matrix used to calculate similarity-based entropy. |

`Weights` |
A vector containing the weights of communities. |

`Communities` |
A vector containing the entropy of communities. |

`Total` |
The total entropy. |

`is.MCentropy`

returns `TRUE`

if the object is of class `MCentropy`

.

`summary.MCentropy`

returns a summary of the object's value.

*entropart*version 1.6-13 Index]