MCentropy {entropart} | R Documentation |
Methods for objects of type "MCentropy
".
is.MCentropy(x)
## S3 method for class 'MCentropy'
plot(x, ...)
## S3 method for class 'MCentropy'
autoplot(object, col = ggplot2::GeomCol$default_aes$fill,
border = ggplot2::GeomCol$default_aes$colour, ...)
## S3 method for class 'MCentropy'
summary(object, ...)
x |
An object to be tested or plotted. |
object |
A |
col |
The color used to fill the bars. See "Color Specification" in |
border |
The color of the borders around the bars. See |
... |
Additional arguments to be passed to the generic methods. |
Meta-community entropy objects are lists containing:
MetaCommunity |
The name of the |
Method |
The method used to calculate entropy ("HCDT", "Similarity-based"). |
Type |
The type of entropy ("alpha", "beta" or "gamma"). |
Order |
The order of entropy |
Correction |
The estimation bias correction used to calculate entropy. |
Tree |
The phylogenetic or functional tree used to calculate phyloentropy. |
Normalized |
Logical. Indicates whether phyloentropy is normalized or proportional to the height of the tree. |
Z |
The matrix used to calculate similarity-based entropy. |
Weights |
A vector containing the weights of communities. |
Communities |
A vector containing the entropy of communities. |
Total |
The total entropy. |
is.MCentropy
returns TRUE
if the object is of class MCentropy
.
summary.MCentropy
returns a summary of the object's value.