Main Package of the EMU Speech Database Management System
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Documentation for package ‘emuR’ version 2.5.0
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A B C D E F G I L M N O P Q R S T U V W
| emuR-package | emuR - Main Package of the EMU Speech Database Management System |
-- A --
| AddListRemoveAttrDefLabelGroup | Add / List / Remove labelGroup to / of / from attributeDefinition of emuDB |
| AddListRemoveLabelGroup | Add / List / Remove global labelGroup to / of / from emuDB |
| AddListRemoveLevelDefinitions | Add / List / Remove level definition to / of / from emuDB |
| AddListRemoveLinkDefinition | Add / List / Remove linkDefinition to / of / from emuDB |
| AddListRemovePerspective | Add / List / Remove perspective to / of / from emuDB |
| AddListRemoveSsffTrackDefinition | Add / List / Remove ssffTrackDefinition to / from / of emuDB |
| AddListRenameRemoveAttributeDefinitions | Add / List / Rename / Remove attribute definition to / of / from emuDB |
| add_attrDefLabelGroup | Add / List / Remove labelGroup to / of / from attributeDefinition of emuDB |
| add_attributeDefinition | Add / List / Rename / Remove attribute definition to / of / from emuDB |
| add_files | Add files to emuDB |
| add_labelGroup | Add / List / Remove global labelGroup to / of / from emuDB |
| add_levelDefinition | Add / List / Remove level definition to / of / from emuDB |
| add_linkDefinition | Add / List / Remove linkDefinition to / of / from emuDB |
| add_perspective | Add / List / Remove perspective to / of / from emuDB |
| add_ssffTrackDefinition | Add / List / Remove ssffTrackDefinition to / from / of emuDB |
| as.spectral | Function to convert an object into an object of class 'spectral'. |
| as.trackdata | Create an Emu trackdata object |
| autobuild_linkFromTimes | Autobuild links between two levels using their time information |
-- B --
| bark | Convert Hertz to Bark and Bark to Hertz |
| bark.default | Convert Hertz to Bark and Bark to Hertz |
| bark.spectral | Convert Hertz to Bark and Bark to Hertz |
| bark.trackdata | Convert Hertz to Bark and Bark to Hertz |
| bind.trackdata | bind trackdata |
| bridge | Three-columned matrix |
| buildtrack | Build trackdata objects from the output of by() |
| by | A method of the generic function by for objects of class 'trackdata' |
| by.trackdata | A method of the generic function by for objects of class 'trackdata' |
-- C --
| cbind | A method of the generic function cbind for objects of class 'trackdata' |
| cbind.trackdata | A method of the generic function cbind for objects of class 'trackdata' |
| classify | classify |
| classplot | Produce a classification plot from discriminant or SVM modelling |
| convert_BPFCollection | Convert a Bas Partitur File Collection (audio and BAS Partitur files) to an emuDB |
| convert_legacyEmuDB | Convert legacy EMU database to the emuDB format |
| convert_TextGridCollection | Convert a TextGridCollection (e.g. .wav & .TextGrid files) to emuDB |
| convert_txtCollection | Converts a collection of audio files and plain text transcriptions into an emuDB |
| convert_wideToLong | convert tracks of a tibble trackdata object to the long form |
| coutts | Segment list of words, read speech, female speaker of Australian English from database epgcoutts |
| coutts.epg | EPG-compressed trackdata from the segment list coutts |
| coutts.l | Vector of word label from the segment list coutts |
| coutts.rms | rms Data to coutts segment list |
| coutts.sam | Trackdata of acoustic waveforms from the segment list coutts |
| coutts2 | Segment list, same as coutts but at a slower speech rate |
| coutts2.epg | EPG-compressed trackdata from the segment list coutts2 |
| coutts2.l | Vector of word label from the segment list coutts2 |
| coutts2.sam | Trackdata of acoustic waveforms from the segment list coutts2 |
| cr | Plot digital sinuoids. |
| create_emuDB | Create empty emuDB |
| create_emuRdemoData | Create demo data for the emuR package |
| create_emuRtrackdata | create emuRtrackdata object |
| create_itemsInLevel | Create new items programmatically |
| create_links | create links between items |
| create_spectrogram_image_as_raster | Create spectrogram image as raster |
| crplot | Function to plot a digital sinusoid and the circle from which it is derived. |
-- D --
| dapply | apply a function to each part of a trackdata object |
| dbnorm | Function to dB-normalise spectral objects |
| dbtopower | Function for inter-converting between decibels and a linear scale |
| dct | Discrete Cosine Transformation |
| dcut | Function to extract a vector or matrix from EMU-Trackdata at a single time point of to create another EMU-trackdata object between two times. |
| dcut.sub | Function to extract a vector or matrix from EMU-Trackdata at a single time point of to create another EMU-trackdata object between two times. |
| ddiff | Differentiation of tracks |
| ddiff.sub | Differentiation of tracks |
| delete_itemsInLevel | Delete items programmatically |
| demo.all | Emu segment list |
| demo.all.f0 | F0 track data for segment list demo.vowels |
| demo.all.fm | Formant track data for segment list demo.vowels |
| demo.all.rms | Emu track data for a rms track for segment list demo.all |
| demo.vowels | Emu segment List |
| demo.vowels.f0 | F0 track data for segment list demo.vowels |
| demo.vowels.fm | Formant track data for segment list demo.vowels |
| dextract | Extract a subset of data from a trackdata object |
| dextract.sub | Extract a subset of data from a trackdata object |
| dim | A method of the generic function dim for objects of class 'trackdata' |
| dim.trackdata | A method of the generic function dim for objects of class 'trackdata' |
| dimnames.trackdata | Dimnames of trackdata object |
| dip | Segment list of diphthongs, two speakers one male, one female , Standard North German, read speech from database kielread |
| dip.fdat | Trackdata of formants from the segment list dip |
| dip.l | Vector of phoneme labels from the segment list dip |
| dip.spkr | Vector of speaker labels from the segment list dip |
| dplot | A function to plot one or more columns of EMU-trackdata as a function of time (DEPRECATED see below) |
| dplot.norm | A function to plot one or more columns of EMU-trackdata as a function of time (DEPRECATED see below) |
| dplot.time | A function to plot one or more columns of EMU-trackdata as a function of time (DEPRECATED see below) |
| dsmooth | Smooth the data in a trackdata object. |
| dsmooth.sub | Smooth the data in a trackdata object. |
| duplicate_level | Duplicate level |
| dur | duration |
-- E --
| e.dft | Spectral vector of a single E vowel produced by a male speaker of Standard North German. |
| ellipse | Calculate ellipse coordinates |
| emu.track | Get trackdata from loaded emuDB |
| emuR | emuR - Main Package of the EMU Speech Database Management System |
| emuRsegs | emuR segment list |
| emuRtrackdata | emuR track data object |
| emusegs | Segment list |
| end.emusegs | Start and end times for EMU segment lists and trackdata objects |
| end.trackdata | Start and end times for EMU segment lists and trackdata objects |
| engassim | Segment list of a sequence of syllable final n or N preceding k or g , isolated words single speaker, Australian English female from database epgassim. |
| engassim.epg | EPG-compressed trackdata from the segment list engassim |
| engassim.l | Vector of phonetic labels from the segment list engassim: nK = nk,ng , sK = sk,sg |
| engassim.w | Vector of word labels from the segment list engassim. |
| epgai | Electropalatographic contact indices |
| epgci | Electropalatographic contact indices |
| epgcog | Electropalatographic centre of gravity |
| epgdi | Electropalatographic contact indices |
| epggs | Plot a grey-scale image of palatographic data. |
| epgplot | Plot palatographic data |
| epgsum | Sum contacts in palatograms. |
| eplot | Plot ellipses for two-dimensional data (DEPRECATED see below) |
| euclidean | Find the inter-euclidean distance for a data matrix |
| euclidean.metric | Find the inter-euclidean distance for a data matrix |
| expand_labels | Label each data sample |
| export_BPFCollection | Exports an emuDB into a BAS Partitur File (BPF) Collection |
| export_seglistToTxtCollection | Exports a segment list to txt collection |
| export_TextGridCollection | Export annotations of emuDB to TextGrid collection |
-- F --
| fapply | Function that applies a function to an EMU spectral object |
| frames | frames |
| frames.time | Find the time and position of a data element. |
| freqtoint | Function to find the column number corresponding to frequencies of a spectral object |
| fric | Segment list of word-medial s or z one male speaker of Standard North German, read speech from database kielread. |
| fric.dft | Spectral trackdata object from the segment list fric. |
| fric.l | Vector of labels from the segment list fric |
| fric.w | Vector of word labels from the segment list fric. |
-- G --
| get.time.element | Get data for a given time |
| get_legalLabels | Set / Get / Remove legal labels of attributeDefinition of emuDB |
| get_levelCanvasesOrder | Set / Get level canvases order of emuDB |
| get_signalCanvasesOrder | Set / Get signalCanvasesOrder of / to / from emuDB |
| get_trackdata | Get trackdata from loaded emuDB |
-- I --
| import_mediaFiles | Import media files to emuDB |
| is.spectral | Function to test whether the object is of class "spectral" |
| is.trackdata | Test whether an object is an Emu trackdata object |
| isol | Segment list of vowels in a d d context isolated word speech, one male speaker of Australian English from database isolated. |
| isol.fdat | Trackdata of formants from the segment list isol |
| isol.l | Vector of vowel phoneme labels from the segment list isol |
-- L --
| label | Get labels / utterances from segment list |
| label.emusegs | Get labels / utterances from segment list |
| linear | Perform linear time normalisation on trackdata. |
| list | emuR segment list |
| list_attrDefLabelGroups | Add / List / Remove labelGroup to / of / from attributeDefinition of emuDB |
| list_attributeDefinitions | Add / List / Rename / Remove attribute definition to / of / from emuDB |
| list_bundles | List bundles of emuDB |
| list_files | List files of emuDB |
| list_labelGroups | Add / List / Remove global labelGroup to / of / from emuDB |
| list_levelDefinitions | Add / List / Remove level definition to / of / from emuDB |
| list_linkDefinitions | Add / List / Remove linkDefinition to / of / from emuDB |
| list_perspectives | Add / List / Remove perspective to / of / from emuDB |
| list_sampleRates | List sample rates of media and annotation (_annot.json) files |
| list_sessions | List sessions of emuDB |
| list_ssffTrackDefinitions | Add / List / Remove ssffTrackDefinition to / from / of emuDB |
| load_emuDB | Load emuDB |
| locus | Calculate locus equations for two-dimensional data |
-- M --
| mahal | Classify using Mahalanobis distance |
| mahal.dist | Calculate mahalanobis distances |
| make.emuRsegs | Make emuDB segment list |
| make.seglist | Make an Emu segment list from the various components |
| makelab | Write out ESPS-style label files |
| Math.trackdata | Track data object |
| Math2.trackdata | Track data object |
| matscan | Read matrix data from a file |
| mel | Convert Hz to the mel scale |
| mel.spectral | Convert Hz to the mel scale |
| mel.trackdata | Convert Hz to the mel scale |
| modify.seglist | Modify one of the components of an Emu segment list |
| moments | Function to calculate statistical moments |
| mu.colour | Function for specifying color, linetype, and line-widths in EMU plotting functions. |
| muclass | Find common elements in vectors |
-- N --
| norm | Normalise speech data |
| normalize_length | Normalize length of segments contained in a 'data.frame' like object returned by 'get_trackdata' |
-- O --
| Ops.trackdata | Track data object |
-- P --
| palate | Obtain a three-dimensional palatographic array |
| perform | Performance (hit rate) of a confusion matrix |
| plafit | Calculate the coefficients of a parabola |
| plot.spectral | Plot spectra from EMU spectral objects |
| plot.trackdata | Produces time-series plots from trackdata |
| polhom | Segment list of four Polish homorganic fricatives from database epgpolish. |
| polhom.epg | EPG-compressed trackdata from the segment list polhom |
| polhom.l | Vector of phonetic labels from the segment list polhom |
| print.emuRsegs | Print emuRsegs segment list |
| print.emuRtrackdata | Print emuRtrackdata object |
-- Q --
| query | Query emuDB |
-- R --
| rad | Function to convert between Hertz and Radians |
| radians | Converts degrees to radians |
| randomise.segs | Randomise or Reverse items in a segment list |
| rbind | A method of the generic function rbind for objects of class trackdata |
| rbind.trackdata | A method of the generic function rbind for objects of class trackdata |
| read.emusegs | Create an Emu segment list from a file |
| read_bundleList | read bundleList |
| remove_attrDefLabelGroup | Add / List / Remove labelGroup to / of / from attributeDefinition of emuDB |
| remove_attributeDefinition | Add / List / Rename / Remove attribute definition to / of / from emuDB |
| remove_labelGroup | Add / List / Remove global labelGroup to / of / from emuDB |
| remove_legalLabels | Set / Get / Remove legal labels of attributeDefinition of emuDB |
| remove_levelDefinition | Add / List / Remove level definition to / of / from emuDB |
| remove_linkDefinition | Add / List / Remove linkDefinition to / of / from emuDB |
| remove_perspective | Add / List / Remove perspective to / of / from emuDB |
| remove_ssffTrackDefinition | Add / List / Remove ssffTrackDefinition to / from / of emuDB |
| rename_attributeDefinition | Add / List / Rename / Remove attribute definition to / of / from emuDB |
| rename_bundles | Rename bundles in emuDB |
| rename_emuDB | Rename emuDB |
| replace_itemLabels | Replace item labels |
| requery_hier | Requery hierarchical context of a segment list in an emuDB |
| requery_seq | Requery sequential context of segment list in an emuDB |
| resample_annots | Resample annotations ('_annot.json') files of emuDB |
| runBASwebservice_all | Runs several BAS webservices, starting from an orthographic transcription |
| runBASwebservice_chunker | Creates a chunk segmentation using the webservice Chunker. |
| runBASwebservice_g2pForPronunciation | Creates canonical pronunciation attributes for a tier of tokenized orthographical words. |
| runBASwebservice_g2pForTokenization | Tokenizes an orthographic transcription. |
| runBASwebservice_maus | Runs MAUS webservice to create a phonetic segmentation |
| runBASwebservice_minni | Creates a rough phonetic segmentation by running the phoneme decoder webservice MINNI. |
| runBASwebservice_pho2sylCanonical | Adds syllabified word labels to a word level that already contains canonical pronunciations. |
| runBASwebservice_pho2sylSegmental | Creates a syllable segmentation on the basis of a phonetic segmentation. |
-- S --
| segment | emuR segment list |
| segmentlist | Segment list |
| serve | Serve EMU database to EMU-webApp |
| SetGetlevelCanvasesOrder | Set / Get level canvases order of emuDB |
| SetGetRemoveLegalLabels | Set / Get / Remove legal labels of attributeDefinition of emuDB |
| SetGetSignalCanvasesOrder | Set / Get signalCanvasesOrder of / to / from emuDB |
| set_legalLabels | Set / Get / Remove legal labels of attributeDefinition of emuDB |
| set_levelCanvasesOrder | Set / Get level canvases order of emuDB |
| set_signalCanvasesOrder | Set / Get signalCanvasesOrder of / to / from emuDB |
| shift | Function to shift the elements of a vector. |
| Slope.test | Slope Test |
| sort.emuRsegs | Sort emuRsegs segment list by session, bundle and sample_start |
| sortmatrix | Sort matrix by label |
| splitstring | Split a string into words. |
| start.emusegs | Start and end times for EMU segment lists and trackdata objects |
| start.trackdata | Start and end times for EMU segment lists and trackdata objects |
| summary.emuDBhandle | Print summary of loaded EMU database (emuDB). |
| Summary.trackdata | Track data object |
-- T --
| track.gradinfo | Calculate gradient summary information for trackdata |
| trackdata | Track data object |
| trackfreq | function to find the frequencies of a spectral object |
| tracktimes | Get the track times from EMU trackdata objects |
| train | Train a Gaussian Model |
| trapply | A method of the generic function by for objects of class 'trackdata' |
-- U --
| update_itemsInLevel | Update items programmatically |
| utt | Get labels / utterances from segment list |
| utt.emusegs | Get labels / utterances from segment list |
-- V --
| vowlax | Segment list of four lax vowels, read speech, one male and one female speaker of Standard North German from database kielread. |
| vowlax.df | Data frame of various parameters and labels from the segment list vowlax |
| vowlax.dft.5 | Spectral matrix centred at the temporal midpoint of the vowels from the segment list vowlax. |
| vowlax.fdat | Trackdata of formants from the segment list vowlax |
| vowlax.fdat.5 | Matrix of formant data extracted at the temporal midpoint from the segment list vowlax. |
| vowlax.fund | Trackdata of fundamental frequency from the segment list vowlax |
| vowlax.fund.5 | Vector of fundamental frequency extracted at the temporal midpoint from the segment list vowlax. |
| vowlax.l | Vector of phoneme labels from the segment list vowlax |
| vowlax.left | Vector of labels preceding the vowels from the segment list vowlax |
| vowlax.right | Vector of labels following the vowels from the segment list vowlax |
| vowlax.rms | Trackdata of RMS energy from the segment list vowlax |
| vowlax.rms.5 | Vector of RMS energy values at the temporal midpoint extracted at the temporal midpoint from the segment list vowlax |
| vowlax.spkr | Vector of speaker labels from the segment list vowlax. |
| vowlax.word | Vector of word labels from the segment list vowlax. |
-- W --
| wordlax.l | Vector of word labels from segment list wordlax |
| write.emusegs | Write an Emu segment list to a file |
| write_bundleList | write bundleList |