PEP-methods {ePCR}

PEP-methods

Description

PEP-methods

print.PEP: Print a PEP object to the console

predict.PEP: Predict for a novel patient from current PEP-ensemble

Usage

## S4 method for signature 'PEP'
print(x, ...)

## S4 method for signature 'PEP'
predict(object, type = "response", newx, x.expand)

Arguments

x

Generic x

...

Additional custom parameters passed on

object

PEP-ensemble model object

type

Type of prediction; either "response" or "ensemble"

newx

New data matrix

x.expand

A function that may expand (i.e. extract features) from the input data matrix. By default this will be the default x.expand saved in the S4-slot of the first ensemble member. If the user wishes to omit this functionality, setting this parameter to 'x.expand = as.matrix' does not expand the input data matrix. Notice that if the user has manually called the 'conforminput' function for the newx-data, it is no longer necessary to expand the data matrix here.