example_scna_table {driveR}

Example Somatic Copy Number Alteration Table

Description

A data set containing the somatic copy number alteration data for the lung adenocarcinoma patient studied in Imielinski M, Greulich H, Kaplan B, et al. Oncogenic and sorafenib-sensitive ARAF mutations in lung adenocarcinoma. J Clin Invest. 2014;124(4):1582-6.

Usage

example_scna_table

Format

A data frame with 3160 rows and 4 variables:

chr

chromosome the segment is located in

start

start position of the segment

end

end position of the segment

log2ratio

log₂

ratio of the segment

Source

https://pubmed.ncbi.nlm.nih.gov/24569458/