determine_hotspot_genes {driveR} | R Documentation |
Determine Hotspot Containing Genes
Description
Determine Hotspot Containing Genes
Usage
determine_hotspot_genes(annovar_csv_path, hotspot_threshold = 5L)
Arguments
annovar_csv_path |
path to 'ANNOVAR' csv output file |
hotspot_threshold |
to determine hotspot genes, the (integer) threshold for the minimum number of cases with certain mutation in COSMIC (default = 5) |
Value
vector of gene symbols of genes containing hotspot mutation(s)
[Package driveR version 0.4.1 Index]