warcolak.convert {dmm}

R Documentation

Convert warcolak data file to format required for a dataframe for dmm() or mdf().

Description

A simple function to relabel the columns of the warcolak dataset from package nadiv, to comply with the requirements of dmm() or mdf().

Usage

warcolak.convert(w)

Arguments

w	An object produced by the call data(warcolak) from package nadiv.

Details

The warcolak dataset has columns named slightly differently from what dmm() requires, but is otherwise compatable. We use this function to do a simple conversion before using warcolak as test data for dmm().

Value

A dataframe containing the following columns:

"Id"

Individual identifier

"SId"

Sire identifier

"DId"

Dam identifier

"Sex"

Coding for sex

"Trait1"

First trait phenotypic value

"Trait2"

Second trait phenotypic value

"t1_a"

First trait additive genetic effect

"t2_a"

Second trait additive genetic effect

"t2_s"

Second trait additive genetic sexlinked effect

"t1_d"

First trait dominance genetic effect

"t2_d"

Second trait dominance genetic effect

"t1_r"

First trait environmental effect

"t2_r"

Second trait environmental effect

Author(s)

Neville Jackson

See Also

Functions dmm(), mdf(). Package nadiv.

Examples

library(dmm)
data(warcolak)
warcolak.df <- warcolak.convert(warcolak)
str(warcolak.df)
rm(warcolak.df)
rm(warcolak)

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