eigenMapMatMult |
Matrix Multiplication using RcppEigen |
eigenMatMult |
Matrix Multiplication using RcppEigen |
getDiffusionProbabilityMatrix |
Diffusion Probability Matrix |
getDistanceMatrix |
Diffusion Distance Matrix |
getLaplacianMatrix |
Evaluate a Laplacian Matrix |
getMeanDistanceMatrix |
Mean distance matrix |
get_DDM |
Diffusion Distance Matrix |
get_ddm_from_eigendec |
Distance Matrix from Laplacian spectral decomposition |
get_DDM_from_Pi |
Diffusion distance matrix from a custom transition matrix |
get_DDM_from_T |
Diffusion distance matrix from a custom transition matrix |
get_diffusion_probability_matrix |
Diffusion Probability Matrix |
get_diffusion_probability_matrix_from_Pi |
Diffusion probability matrix from transition matrix |
get_diffusion_probability_matrix_from_T |
Diffusion probability matrix from transition matrix |
get_diffu_Pt |
Diffusion Probability Matrix |
get_diffu_Pt_from_Pi |
Diffusion probability matrix from transition matrix |
get_diffu_Pt_from_T |
Diffusion probability matrix from transition matrix |
get_distance_matrix |
Diffusion Distance Matrix |
get_distance_matrix_from_Pi |
Diffusion distance matrix from a custom transition matrix |
get_distance_matrix_from_T |
Diffusion distance matrix from a custom transition matrix |
get_laplacian |
Evaluate a Laplacian Matrix |
get_mean_distance_matrix |
Mean distance matrix |
get_spectral_decomp |
Laplacian Spectral Decomposition |
plotHeatmap |
Plot distance matrix as heatmap |
plot_distance_matrix |
Plot distance matrix |