snpInsideRunsCpp {detectRUNS}

Function to count number of times a SNP is in a RUN

Description

Function to count number of times a SNP is in a RUN

Usage

snpInsideRunsCpp(runsChrom, mapChrom, genotypeFile)

Arguments

runsChrom

R object (dataframe) with results per chromosome

mapChrom

R map object with SNP per chromosome

genotypeFile

genotype (.ped) file location

Value

dataframe with counts per SNP in runs (per population)