| getCOI {dcifer} | R Documentation |
Calculate COI
Description
Calculates complexity of infection for a list of samples, using the number of detected alleles.
Usage
getCOI(dsmp, lrank = 2)
Arguments
dsmp |
a list with each element corresponding to one sample. |
lrank |
the rank of the locus that will determine a sample's COI (loci are ranked by the number of detected alleles). |
Value
a vector with estimated COI for each sample.
Examples
coi <- getCOI(dsmp, lrank = 2)
[Package dcifer version 1.2.1 Index]