Circular-Linear Copulas with Angular Symmetry for Movement Data


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Documentation for package ‘cylcop’ version 0.2.0

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A B C D F G H J L M N O P Q R S T V W

-- A --

angstep2xy Calculate the Next Position in a Trajectory from a Turn Angle and a Step Length

-- B --

bearing Compass Bearing of a Line Between 2 Points

-- C --

ccylcop Conditional Distributions of Circular-Linear Copulas
ccylcop-method Conditional Distributions of Circular-Linear Copulas
circ_plot Deprecated functions
cop_plot Deprecated functions
cop_scat_plot Deprecated functions
cor_cyl Estimate a Rank-Based Circular-Linear Correlation Coefficient
cramer_vonmises Cramér-von-Mises criterion
Cylcop Distribution, Density, and Random Number Generation for Circular-Linear Copulas'
cylcop-deprecated Deprecated functions
cylcop_get_option Get Package Options
cylcop_set_option Set Package Options
cyl_copula-class An S4 Class of Bivariate Copulas on the Cylinder
cyl_cubsec Construction of "cyl_cubsec" Objects
cyl_cubsec-class An S4 Class of Bivariate Copulas with Cubic Sections
cyl_quadsec Construction of "cyl_quadsec" Objects
cyl_quadsec-class An S4 Class of Bivariate Copulas with Quadratic Sections
cyl_rect_combine Construction of "cyl_rect_combine" Objects
cyl_rect_combine-class An S4 Class of Circular-Linear Copulas Generated from a Rectangular Patchwork
cyl_rot_combine Construction of "cyl_rot_combine" Objects
cyl_rot_combine-class An S4 Class of Circular-Linear Copulas generated from Linear Combinations of Copulas
cyl_vonmises Construction of "cyl_vonmises" Objects
cyl_vonmises-class An S4 Class of Bivariate von Mises Copulas

-- D --

dcylcop Distribution, Density, and Random Number Generation for Circular-Linear Copulas'
dcylcop-method Distribution, Density, and Random Number Generation for Circular-Linear Copulas'
ddens Density, Distribution, Random Number Generation and Quantiles of Kernel Density Estimates
dens Density, Distribution, Random Number Generation and Quantiles of Kernel Density Estimates
dgammamix Density, Distribution, Quantiles and Random Number Generation for the mixed gamma distribution
djoint Density, Distribution, Quantiles and Random Number Generation for joint distributions
dlnormmix Density, Distribution, Quantiles and Random Number Generation for the mixed log-normal distribution
dnormmix Density, Distribution, Quantiles and Random Number Generation for the mixed normal distribution
dvonmisesmix Density, Distribution, Quantiles and Random Number Generation for the mixed von Mises Distribution
dweibullmix Density, Distribution, Quantiles and Random Number Generation for the mixed Weibull distribution
dwrappedcauchy Density, Distribution, Quantiles and Random Number Generation for the Wrapped Cauchy Distribution

-- F --

fit_angle Fit a Circular Univariate Distribution
fit_cylcop_cor Estimate Copula Parameters from Correlation Measures
fit_cylcop_cor-method Estimate Copula Parameters from Correlation Measures
fit_cylcop_ml Estimate Parameters of a Circular-Linear Copula According to Maximum Likelihood
fit_steplength Fit a Linear Univariate Distribution
full2half_circ Convert Angle from Full Circle to Half Circle

-- G --

gammamix Density, Distribution, Quantiles and Random Number Generation for the mixed gamma distribution

-- H --

half2full_circ Convert Angle from Half Circle to Full Circle

-- J --

joint Density, Distribution, Quantiles and Random Number Generation for joint distributions

-- L --

lnormmix Density, Distribution, Quantiles and Random Number Generation for the mixed log-normal distribution

-- M --

make_traj Deprecated functions
mi_cyl Estimate the Mutual Information Between a Circular and a Linear Random Variable
mle.mixedvonmises Deprecated functions
mle.vonmisesmix Mixed von Mises Maximum Likelihood Estimates

-- N --

normmix Density, Distribution, Quantiles and Random Number Generation for the mixed normal distribution
numerical_conditional_cop Numerically Calculate the Conditional Copula
numerical_inv_conditional_cop Numerically calculate the inverse of the conditional copula

-- O --

optCor Estimate Copula Parameters from Correlation Measures
optML Estimate Parameters of a Circular-Linear Copula According to Maximum Likelihood
opt_auto Automatically Find the Best Fitting Copula
opt_circ_bw Find the Optimal Bandwidth for a Circular Kernel Density Estimate
opt_lin_bw Find the Optimal Bandwidth for a Linear Kernel Density Estimate

-- P --

pcylcop Distribution, Density, and Random Number Generation for Circular-Linear Copulas'
pcylcop-method Distribution, Density, and Random Number Generation for Circular-Linear Copulas'
pdens Density, Distribution, Random Number Generation and Quantiles of Kernel Density Estimates
pgammamix Density, Distribution, Quantiles and Random Number Generation for the mixed gamma distribution
pjoint Density, Distribution, Quantiles and Random Number Generation for joint distributions
plnormmix Density, Distribution, Quantiles and Random Number Generation for the mixed log-normal distribution
plot-method Plot "cyl_copula" Objects
plot_circ_hist Circular Histogram of Turn Angles
plot_cop_scat Scatterplot of Copula Values
plot_cop_surf Surface Plot or Heat Map of the Distribution or the Density of a Copula
plot_joint_box Circular Boxplot of Turn Angles and Step Lengths
plot_joint_circ Circular Scatterplot of Turn Angles and Step Lengths
plot_joint_scat Scatterplot of Turn Angles and Step Lengths
plot_track Plot a Trajectory in Euclidean Space
pnormmix Density, Distribution, Quantiles and Random Number Generation for the mixed normal distribution
prob Calculate the C-Volume of a "cyl_copula" Copula
prob-method Calculate the C-Volume of a "cyl_copula" Copula
pvonmisesmix Density, Distribution, Quantiles and Random Number Generation for the mixed von Mises Distribution
pweibullmix Density, Distribution, Quantiles and Random Number Generation for the mixed Weibull distribution
pwrappedcauchy Density, Distribution, Quantiles and Random Number Generation for the Wrapped Cauchy Distribution

-- Q --

qdens Density, Distribution, Random Number Generation and Quantiles of Kernel Density Estimates
qgammamix Density, Distribution, Quantiles and Random Number Generation for the mixed gamma distribution
qlnormmix Density, Distribution, Quantiles and Random Number Generation for the mixed log-normal distribution
qmixedvonmises Deprecated functions
qnormmix Density, Distribution, Quantiles and Random Number Generation for the mixed normal distribution
qvonmisesmix Density, Distribution, Quantiles and Random Number Generation for the mixed von Mises Distribution
qweibullmix Density, Distribution, Quantiles and Random Number Generation for the mixed Weibull distribution
qwrappedcauchy Density, Distribution, Quantiles and Random Number Generation for the Wrapped Cauchy Distribution

-- R --

rcylcop Distribution, Density, and Random Number Generation for Circular-Linear Copulas'
rcylcop-method Distribution, Density, and Random Number Generation for Circular-Linear Copulas'
rdens Density, Distribution, Random Number Generation and Quantiles of Kernel Density Estimates
rgammamix Density, Distribution, Quantiles and Random Number Generation for the mixed gamma distribution
rjoint Density, Distribution, Quantiles and Random Number Generation for joint distributions
rlnormmix Density, Distribution, Quantiles and Random Number Generation for the mixed log-normal distribution
rnormmix Density, Distribution, Quantiles and Random Number Generation for the mixed normal distribution
rvonmisesmix Density, Distribution, Quantiles and Random Number Generation for the mixed von Mises Distribution
rweibullmix Density, Distribution, Quantiles and Random Number Generation for the mixed Weibull distribution
rwrappedcauchy Density, Distribution, Quantiles and Random Number Generation for the Wrapped Cauchy Distribution

-- S --

scat_plot Deprecated functions
set_cop_param Change Attributes of "cyl_copula" Objects
set_cop_param-method Change Attributes of "cyl_copula" Objects
show-method Print Information of "cyl_copula" Objects
silent Set Package Options

-- T --

traj_get Get a Trajectory from Coordinates
traj_plot Deprecated functions
traj_sim Generate a Trajectory with Correlated Step Lengths and Turn Angles

-- V --

verbose, Set Package Options
vonmisesmix Density, Distribution, Quantiles and Random Number Generation for the mixed von Mises Distribution

-- W --

wasserstein Calculate the Wasserstein Distance
weibullmix Density, Distribution, Quantiles and Random Number Generation for the mixed Weibull distribution
wrappedcauchy Density, Distribution, Quantiles and Random Number Generation for the Wrapped Cauchy Distribution