scanSD {ctl}R Documentation

scanSD - Analyze the differences in Standard Deviation between genotypes between two traits

Description

Analyze the differences in Standard Deviation between genotypes between two traits

Usage

scanSD(genotypes, phenotypes, phenocol=c(1,2), doRank = FALSE)

Arguments

genotypes

Matrix of genotypes. (individuals x markers)

phenotypes

Matrix of phenotypes. (individuals x phenotypes)

phenocol

Which phenotype column(s) should be plotted against each other, Default: phenotype 1 versus 2

doRank

Transform quantitative data into ranked data before analyzing the slope.

Details

TODO

Value

TODO

Note

TODO

Author(s)

Danny Arends Danny.Arends@gmail.com
Maintainer: Danny Arends Danny.Arends@gmail.com

References

TODO

See Also

Examples

  library(ctl)
  data(multitrait)      # Arabidopsis Thaliana (R/qtl cross object)

  sds <- scanSD(pull.geno(multitrait),pull.pheno(multitrait))

[Package ctl version 1.0.0-7 Index]