Transform Counts in RNA-Seq Data Analysis

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Documentation for package ‘countTransformers’ version 0.0.6

• DESCRIPTION file.
• Package NEWS.

Help Pages

es	A Simulated Data Set
getJaccard	Calculate Jaccard Index for Two Binary Vectors
l2Transformer	Log Based Count Transformation Minimizing Sum of Sample-Specific Squared Difference
lTransformer	Log-based transformation
lv2Transformer	Log and VOOM Based Count Transformation Minimizing Sum of Sample-Specific Squared Difference
lvTransformer	Log and VOOM Transformation
r2Transformer	Root Based Count Transformation Minimizing Sum of Sample-Specific Squared Difference
rTransformer	Root Based Transformation
rv2Transformer	Root and VOOM Based Count Transformation Minimizing Sum of Sample-Specific Squared Difference
rvTransformer	Root and VOOM Transformation
wilcoxWrapper	Wrapper Function for Wilcoxon Rank Sum Test