soil_phylo_otu {corncob}

Soil data, otu table as data frame.

Description

A data frame made from a soil 'phyloseq' object with only otu count data.

Usage

soil_phylo_otu

Format

A phyloseq-class experiment-level object with an OTU table.

otu_table

OTU table with 7,770 taxa and 119 samples

References

Whitman, T., Pepe-Ranney, C., Enders, A., Koechli, C., Campbell, A., Buckley, D. H., Lehmann, J. (2016). Dynamics of microbial community composi-tion and soil organic carbon mineralization in soil following addition of pyrogenic andfresh organic matter. The ISME journal, 10(12):2918. <doi: 10.1038/ismej.2016.68>.