convert_phylo {corncob}

Function to subset and convert phyloseq data

Description

Function to subset and convert phyloseq data

Usage

convert_phylo(data, select)

Arguments

data

a phyloseq object

select

Name of OTU or taxa to select, must match taxa name in data

Value

A data.frame object, with elements W as the observed counts, M as the sequencing depth, and the sample data with their original names.