SNPs {compareGroups}

SNPs in a case-control study

Description

SNPs data.frame contains selected SNPs and other clinical covariates for cases and controls in a case-control study

SNPs.info.pos data.frame contains the names of the SNPs included in the data set 'SNPs' including their chromosome and their genomic position

Usage

data(SNPs)

Format

'SNPs' data.frame contains the following columns:

id	identifier of each subject
casco	case or control status: 0-control, 1-case
sex	gender: Male and Female
blood.pre	arterial blood presure
protein	protein levels
snp10001	SNP 1
snp10002	SNP 2
...	...
snp100036	SNP 36

'SNPs.info.pos' data.frame contains the following columns: A data frame with 35 observations on the following 3 variables.

snp

name of SNP

chr

name of chromosome

pos

genomic position

Source

Data obtained from the <code>SNPassoc</code> package.