tester_marg {colocPropTest}

run proportional test directly on marginal test stats from coloc datasets

Description

run proportional test directly on marginal test stats from coloc datasets

Usage

tester_marg(j, S1, S2, LD1, LD2 = LD1)

Arguments

j

indices of thw two snps

S1

coloc dataset 1

S2

coloc dataset 2

LD1

LD matrix for dataset 1 - rownames, colnames capture the snps and S1$snp[j] must be represented

LD2

LD matrix for dataset 2 - rownames, colnames capture the snps and S2$snp[j] must be represented. if not supplied, defaults to LD1

Value

result from estprop