map_cond {coloc}

find the next most significant SNP, conditioning on a list of sigsnps

Description

Internal helper function for finemap.signals

Usage

map_cond(D, LD, YY, sigsnps = NULL)

Arguments

D

dataset in standard coloc format

LD

named matrix of r

YY

sum(y^2)

sigsnps

names of snps to mask

Value

named numeric - Z score named by snp

Author(s)

Chris Wallace