x_HIV {coda4microbiome}

HIV

Description

Microbiome abundances (60 taxa and 155 individuals) from an HIV study (Noguera-Julian et al. 2016).

Format

The dataset contains three objects:

x_HIV

microbiome abundance matrix for 155 individuals (rows) and 60 genera (columns)

y_HIV

a factor, specifying if the individual is HIV positive or (Pos) or negative (Neg).

MSM_HIV

a factor, indicating sexual preferences: MSM (Men who have Sex with Men) or not (nonMSM).

References

doi:10.1016/j.ebiom.2016.01.032