Visualise Clusterings at Different Resolutions


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Documentation for package ‘clustree’ version 0.5.1

Help Pages

clustree-package Clustree
clustree Plot a clustering tree
clustree.data.frame Plot a clustering tree
clustree.matrix Plot a clustering tree
clustree.Seurat Plot a clustering tree
clustree.seurat Plot a clustering tree
clustree.SingleCellExperiment Plot a clustering tree
clustree_overlay Overlay a clustering tree
clustree_overlay.data.frame Overlay a clustering tree
clustree_overlay.matrix Overlay a clustering tree
clustree_overlay.Seurat Overlay a clustering tree
clustree_overlay.seurat Overlay a clustering tree
clustree_overlay.SingleCellExperiment Overlay a clustering tree
nba_clusts Clustered NBA positions dataset
sc_example Simulated scRNA-seq dataset