memroblist-class {clusterCons} | R Documentation |
Class "memroblist"
Description
Objects of class 'memroblist'
are created to hold the membership robustness scores for the features (e.g. genes) of a cluster.
Objects from the Class
Objects can be created by calls of the form new("memroblist", ...)
, although these objects are normally created internally by the memrob
function.
Slots
mrl
:Object of class
"data.frame"
- the membership robustness list itself
Author(s)
Dr. T. Ian Simpson ian.simpson@ed.ac.uk
References
Merged consensus clustering to assess and improve class discovery with microarray data. Simpson TI, Armstrong JD and Jarman AP. BMC Bioinformatics 2010, 11:590.
See Also
Also see the memrob
function/
Examples
showClass("memroblist")
#load a cmr
data(testcmr);
#calculate the membership robustness for agnes, k=4
mr <- memrob(testcmr$e2_agnes_k4);
#get a membership robustness list
mrl <- mr$cluster1;
[Package clusterCons version 1.2 Index]