checkVarInData |
Check if specified variables are in the data. If they are not, they are removed from specified variables and a message is printed. |
clinColors |
Colors of 'clinUtils' |
clinLinetypes |
Linetypes of 'clinUtils' |
clinShapes |
Shapes of 'clinUtils' |
clinShapesText |
Shapes of 'clinUtils' as text |
clinUtils-palette |
Parameters for all palette functions for clinical visualizations. |
colorPaletteNRIND |
Color palette for a standard CDISC Normal/Reference Range Indicator. |
compareDiff |
Get differences between two data.frames |
compareTables |
Compare tables |
comparisonTables-common-args |
General parameters used for the comparison table functionality |
convertToDatatable |
Convert to data.table |
convertToDateTime |
Convert character vector to date/time object |
dataADaMCDISCP01 |
Example of ADaM datasets from the CDISC original Pilot 01 study |
dataSDTMCDISCP01 |
Example of SDTM datasets from the CDISC original Pilot 01 study |
exportDiffData |
Export the 'diff.data' object from 'compareDiff' to a user-friendly format |
formatDetailsComparison |
Format details comparison |
formatDTBarVar |
Format a variable in a 'datatable' as a barplot. |
formatLabel |
Concatenate and format text strings to a label |
formatLabelChunk |
Concatenate and format text strings to a chunk label |
formatLongLabel |
Format a variable with long labels |
formatTableLabel |
Concatenate and format text strings to a label of a table |
formatVarForPlotLabel |
Format parameter variable to be displayed in the labels of a plot |
getClinDT |
Create an interactive table to display clinical data |
getClinDTButtons |
Get a default set of buttons to be included in the interactive table for clinical data. |
getColorPalette |
Get a color palette for clinical visualizations. |
getLabelParamcd |
Get label for a parameter code |
getLabelVar |
Get label for a variable of the dataset |
getLabelVars |
Get label of the variables in SAS dataset(s) |
getLinetypePalette |
Get a linetype palette for clinical visualizations. |
getPaletteCDISC |
Get standard palette for typical CDISC variables. |
getSetDiff |
Get additions/removals |
getShapePalette |
Get a shape palette for clinical visualizations. |
knitPrintListObjects |
Include a list of objects in a knitr document |
knitPrintListPlots |
Include a list of plots in a knitr document |
loadDataADaMSDTM |
Load data from ADaM/SDTM file(s). |
mergeDiffWithData |
Merge the 'diff.data' object from 'compareDiff' with the original 'newData' or 'oldData'. |
mergeInputDiff |
Custom merge of difference data with input data |
reorderColumns |
Function for reordering columns |
roundHalfUp |
Round a number with 'rounding up' strategy for rounding off a 5 |
roundHalfUpTextFormat |
Round a number with 'round-up' strategy for rounding off a 5 in text format |
shapePaletteNRIND |
Shape palette for a standard CDISC Normal/Reference Range Indicator. |
simpleCap |
Capitalize the first letter of a word/sentence. |