circ_loess {circhelp} | R Documentation |
An implementation of circular-linear locally-weighted regression (LOESS)
Description
Provides an locally-weighted average when the independent variable is circular and depended variable is linear. Mainly to use with ggplot2.
Usage
circ_loess(
formula = NULL,
data = NULL,
angle = NULL,
y = NULL,
xseq = NULL,
circ_space = NULL,
span = 0.75,
...
)
Arguments
formula |
the formula, e.g., y ~ x |
data |
data to use |
angle |
a vector of angles (not used if a formula is provided) |
y |
dependent variable vector (not used if a formula is provided) |
xseq |
a grid to compute predictions on (optional, the default is to use 500 points spanning the circle) |
circ_space |
circular space to use (90, 180, 360, or 2*pi) |
span |
a span to adjust the degree of smoothing |
... |
other arguments (ignored) |
Details
Weights for the regression are computed as
\[w = (1-(d/d_{max})^3)^3\]
where d is the angular difference between the point at which the estimate is computed and the angles in the data, and \(d_{max}\) is the maximum possible distance. If span
is above 1, all points are included and \(d_{max} = {circ\_space}/(4*span)\). Otherwise, a proportion \(\alpha\) of the points included based on their distance to the point at which the estimate is computed and \(d_{max}\) is the corresponding maximal distance.
Value
an object of circ_loess
class with the following parameters:
-
angle
the angles in the data -
y
the dependent variable vales in the data -
xseq
the grid on which the loess values are estimated -
y_est
the estimated loess values -
y_se
standard errors -
w
weights -
circ_space
circular space used -
span
span used
See Also
Examples
p <- ggplot(Pascucci_et_al_2019_data, aes(x = orientation, y = err)) +
geom_point(alpha = 0.05) +
labs(x = "Orientation, deg.", y = "Error, deg.")
p1 <- p + geom_smooth(method = "loess") + ggtitle("Standard LOESS")
p2 <- p + geom_smooth(method = "circ_loess", method.args = list(circ_space = 180, span = 0.5)) +
ggtitle("Circular LOESS, span = 0.5")
p3 <- p + geom_smooth(method = "circ_loess", method.args = list(circ_space = 180, span = 0.2)) +
ggtitle("Circular LOESS, span = 0.2")
(p1 + p2 + p3)