impact_gene_info {cbioportalR}

IMPACT Gene Meta Data

Description

Dataframe labeling all genes included in IMPACT panels along with their corresponding platform ID and Entrez ID.

Usage

impact_gene_info

Format

A data frame with 470 genes

hugo_symbol

Factor w/ 574 levels, Column containing all HUGO symbols genes included in IMPACT

entrez_id

Integer, contains all Entrez IDs for genes included in IMPACT

platform_341

Character, indicates whether each gene was included in IMPACT platform 341. Options are included and ⁠not included⁠

platform_410

Character, indicates whether each gene was included in IMPACT platform 410. Options are included and ⁠not included⁠

platform_468

Character, indicates whether each gene was included in IMPACT platform 468. Options are included and ⁠not included⁠

alias

A nested dataframe of aliases for each gene and corresponding entrez gene ids for aliases if they exist

Source

http://www.cbioportal.org/