find_regulators_with_recurring_edges {bulkAnalyseR} | R Documentation |
Find recurring regulators
Description
This function finds regulators that appear as the same network edge in more than one of the input networks.
Usage
find_regulators_with_recurring_edges(weightMatList, plotConnections)
Arguments
weightMatList |
a list of (weighted) adjacency matrices; each list element must be an adjacency matrix with regulators in rows, targets in columns |
plotConnections |
the number of connections to subset to |
Value
A vector containing the names of the recurring regulators
Examples
weightMat1 <- matrix(
c(0.1, 0.4, 0.8, 0.3), nrow = 2, ncol = 2,
dimnames = list("regulators" = c("r1", "r2"), "targets" = c("t1", "t2"))
)
weightMat2 <- matrix(
c(0.1, 0.2, 0.8, 0.3), nrow = 2, ncol = 2,
dimnames = list("regulators" = c("r1", "r2"), "targets" = c("t1", "t2"))
)
find_regulators_with_recurring_edges(list(weightMat1, weightMat2), 2)
[Package bulkAnalyseR version 1.1.0 Index]