Bayesian State-Space Models for Animal Movement

Documentation for package ‘bsam’ version 1.1.3

bsam-package	Fit Bayesian state-space models to animal tracking data
bsam	Fit Bayesian state-space models to animal tracking data
dat4jags	Correlated Random Walk Filter
diagSSM	Deprecated functions.
diag_ssm	Plot standard McMC convergence diagnostics to help determine lack of model convergence.
ellie1	Elephant seal Argos satellite data (1 individual)
ellie2	Elephant seal Argos satellite data (2 individuals)
fitSSM	Deprecated functions.
fit_ssm	Fit Bayesian state-space models to animal movement data
get_summary	Extract summary output and optionally export as a .csv file.
hssm	Fits hierarchical state-space models to Argos data
map_ssm	Plot estimated track, behavioural states and observations on a map.
plotSSM	Deprecated functions.
plot_fit	Plot the 1-D time-series of estimated location and behavioural states
simulate	Simulate from the DCRW model with Argos location errors
ssm	Fits state-space models to Argos data
tpar	ARGOS Error Fixed Parameters