seq_remove_position {bioseq} | R Documentation |
Remove a region between two positions in sequences.
Description
Remove a region between two positions in sequences.
Usage
seq_remove_position(x, position_in, position_out)
Arguments
x |
a DNA, RNA or AA vector. |
position_in |
an integer giving the position where to start to remove. |
position_out |
an integer giving the position where to stop to remove. |
Value
A vector of same class as x
.
See Also
str_remove
from stringr
for the underlying implementation.
Other string operations:
seq-replace
,
seq_combine()
,
seq_count_pattern()
,
seq_crop_pattern()
,
seq_crop_position()
,
seq_detect_pattern()
,
seq_extract_pattern()
,
seq_extract_position()
,
seq_remove_pattern()
,
seq_replace_position()
,
seq_split_kmer()
,
seq_split_pattern()
Examples
x <- dna("ACGTTAGTGTAGCCGT", "CTCGAAATGA")
seq_remove_position(x, 2, 6)
seq_remove_position(x, 1:2, 3:4)
[Package bioseq version 0.1.4 Index]