calculate_aberr {biodosetools}

Aberration calculation functions

Description

Aberration calculation functions

Usage

calculate_aberr_power(data, aberr_prefix = "C", power = 1)

calculate_aberr_mean(X, N)

calculate_aberr_var(X, X2, N)

calculate_aberr_disp_index(mean, var)

calculate_aberr_u_value(X, N, mean, var, assessment_u = 1)

init_aberr_table(
  data,
  type = c("count", "case"),
  aberr_module = c("dicentrics", "translocations", "micronuclei")
)

Arguments

data

Count or case data.

aberr_prefix

Prefix of the aberrations in the data.

power

Power of aberration.

X

Sum of detected aberrations.

N

Number of cells analysed.

X2

Quadratic sum of detected aberrations.

mean

Mean.

var

Variance.

assessment_u

Expected u-value of the assessment. For a Poisson distribution this should be unity.

type

Type of input data. Either "count" and "case".

aberr_module

Aberration module.