load.revised.otu {bio.infer} | R Documentation |
Loads a user-revised OTU table
Description
If manual correction of the OTU selections is desired, these
corrections should be made on the "sum.otu.txt" file provided by
get.otu
. The corrections should be saved as
tab-delimited text, and then load.revised.otu
run.
Usage
load.revised.otu(bcnt.otu, otufname = "sum.otu.txt")
Arguments
bcnt.otu |
Original benthic count file with OTU designations.
Output from |
otufname |
File name of revised OTU assignments. |
Details
The benthic count data frame
is assumed to be the original output from get.otu
, and
therefore has a field called TNAME
.
Value
The script returns a new benthic count file that incorporates the corrections to the OTU table.
Author(s)
Lester L. Yuan
See Also
[Package bio.infer version 1.3-6 Index]