as.Biclust {biclustermd} | R Documentation |
Convert a biclustermd
object to a Biclust
object
Description
Convert a biclustermd
object to a Biclust
object
Usage
as.Biclust(object)
Arguments
object |
The |
Value
Returns an object of class Biclust
.
Examples
data("synthetic")
bc <- biclustermd(synthetic, col_clusters = 3, row_clusters = 2,
miss_val = mean(synthetic, na.rm = TRUE),
miss_val_sd = sd(synthetic, na.rm = TRUE),
col_min_num = 2, row_min_num = 2,
col_num_to_move = 1, row_num_to_move = 1,
max.iter = 10)
bc
as.Biclust(bc)
# biclust::drawHeatmap won't work since it doesn't exclude NAs
## Not run: biclust::drawHeatmap(synthetic, as.Biclust(bc), 6)
# bicluster 6 is in the top right-hand corner here:
autoplot(bc)
# compare with bicust::drawHeatmap2:
biclust::drawHeatmap2(synthetic, as.Biclust(bc), 6)
# bicluster 3 is in the bottom right-hand corner here:
autoplot(bc)
# compare with bicust::drawHeatmap2:
biclust::drawHeatmap2(synthetic, as.Biclust(bc), 3)
[Package biclustermd version 0.2.3 Index]