heatmapBC {biclust} | R Documentation |
Other than drawHeatmap
this function plots all or a chosen number of bicluster in one plot even if they were overlapping.
heatmapBC(x, bicResult, number = 0, local = TRUE, order = FALSE, outside = FALSE, ...)
x |
The data matrix where the bicluster is to be drawn. |
bicResult |
BiclustResult object with a bicluster result set. |
number |
Number of bicluster to be drawn from the result set 'bicResult'. If the default 0 is chosen all bicluster of the bicResult are drawn. |
local |
If |
order |
If |
outside |
If |
... |
Additional plot options |
Overlap plotting only works for two neighbor bicluster defined by the order in the number slot.
Sebastian Kaiser
drawHeatmap
,parallelCoordinates
set.seed(1234) data(BicatYeast) resplaid <- biclust(BicatYeast, BCPlaid(), verbose = FALSE) heatmapBC(x = BicatYeast, bicResult = resplaid)