A Family of Beta Mixture Models for Clustering Beta-Valued DNA Methylation Data

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Documentation for package ‘betaclust’ version 1.0.3

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

AUC_WD_metric	AUC and WD function
betaclust	The betaclust wrapper function
beta_k	Fit the K.. model
beta_kn	Fit the KN. model
beta_kr	Fit the K.R Model
DMC_identification	The DMC identification function
ecdf.betaclust	The empirical cumulative distribution function plot
em_aic	Akaike Information Criterion
em_bic	Bayesian Information Criterion
em_icl	Integrated Complete-data Likelihood (ICL) Criterion
legacy.data	MethylationEPIC manifest data.
pca.methylation.data	DNA methylation data from patients with prostate cancer
plot.betaclust	Plots for visualizing the betaclust class object
summary.betaclust	Summarizing the beta mixture model fits
threshold	Thresholds under the K.. and the KN. models