read.fasta_to_df {baseq} | R Documentation |
Read a fasta file into a dataframe and assign to the environment
Description
This function reads a fasta file and creates a dataframe with two columns: Header and Sequence. The dataframe is then assigned to the environment with the name same as the fasta file name but without the .fasta extension.
Usage
read.fasta_to_df(fasta_file)
Arguments
fasta_file |
The path to the fasta file to be read. |
Value
This function does not return anything. It assigns the resulting dataframe to the environment.
Examples
# Read in sequences from a FASTA file
sample_file_path <- system.file("extdata", "sample_fa.fasta", package = "baseq")
read.fasta_to_df(sample_file_path)
[Package baseq version 0.1.4 Index]