plot.wDist {assignR} | R Documentation |
Plot weighted distance and bearing distributions
Description
Plot the output from wDist
, including weighted kernel density distributions for distance and bearing of travel.
Usage
## S3 method for class 'wDist'
plot(x, ..., bin = 20, pty = "both", index = c(1:5))
Arguments
x |
A wDist object |
... |
Other arguments to be passed to plot |
bin |
numeric. Bin width used to generate rose plot of travel bearings, in degrees. Must be a factor of 360. |
pty |
character. Type of plot to produce. Must be one of “dist”, “bear”, or “both”. |
index |
numeric. Which items in x to plot? Numeric vector of up to 5 integers. Values in excess of 5 or exceeding the length of x will be ignored. |
Details
For the default pty
, two plot panels will be printed to the active graphical device showing the distance and bearing distributions for (up to) the first five samples in wd
. If more than five items exist in wd
, those beyond the fifth will be ignored and a message returned.
See Also
Examples
# load hydrogen isotope data for human hair in North America
d = subOrigData(group = "Modern human", mask = naMap, niter = 100)
# rescale from environmental isoscape to tissue isoscape
r = calRaster(known = d, isoscape = d2h_lrNA, mask = naMap)
# four unknown-origin examples
id = c("A", "B", "C", "D")
d2H = c(-110, -90, -105, -102)
un = data.frame(id,d2H)
# posterior probabilities
pp = pdRaster(r, unknown = un, mask = naMap)
# random collection locations
sites = d$data[sample(seq(length(d$data)), 4),]
# generate a wDist object
wd = wDist(pp, sites)
# plot distributions
plot(wd)
# plot bearing distriubtion for sample B with a finer bin size
plot(wd, bin = 5, pty = "bear", index = 2)