Structured Allometric Models for Trees


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Documentation for package ‘allometric’ version 2.3.0

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allometric-package allometric: Structured Allometric Models for Trees
%in%-method Check if a Taxon contains a character
==-method Check equivalence of fixed effects models
==-method Check equivalence of mixed effects models
add_model Add a model to a publication
add_set Add a set of models to a publication
add_set-method Add a set of models to a publication
aggregate_taxa Aggregate family, genus, and species columns of 'tbl_df" into taxa data structure
allometric allometric: Structured Allometric Models for Trees
brackett_acer Brackett Acer Volume Model
brackett_rubra An object of class 'FixedEffectsModel'
check_models_installed Check if allometric models are currently installed
fia_trees FIA Trees Data
FixedEffectsModel Create a fixed effects model
FixedEffectsSet Create a set of fixed effects models
get_component_defs Load the component definitions
get_measure_defs Load the measure definitions
get_params_path Get the parameter search path
get_variable_def Get the definition of a variable in the variable naming system.
ingest_models Ingest a set of models by running the publication files
install_models Install allometric models from the models repository
load_models Load a locally installed table of allometric models
load_parameter_frame Load a parameter frame from the models/parameters directory
map_publications Iteratively process publication files
merge.model_tbl Merge a 'model_tbl' with another data frame.
MixedEffectsModel Create a mixed effects model
MixedEffectsSet Create a set of mixed effects models
model_call Get the function call for a model
predict Predict with an allometric model
predict-method Predict with an allometric model
predict_allo Predict allometric attributes using a column of allometric models
Publication Create a publication that contains allometric models
select_model Select an allometric model
set_params_path Set the parameter search path
Taxa Group taxons together
Taxon Create a taxonomic hierarchy
toJSON Convert a model or publication to a JSON representation
toJSON-method Convert a fixed effects model to a JSON representation
unnest_models Unnest columns of a dataframe
unnest_taxa Unnest the taxa column of a 'model_tbl'
unnest_taxa.model_tbl Unnest the taxa column of a 'model_tbl'