batchExperiment {afmToolkit}R Documentation

Example of an afmexperiment data class.

Description

An afmexperiment list containing 14 afmdata Force-distance experiments. Each experiment has three segments ("approach", "pause" and "retract") and they are divided in two groups depending on the covering of the sample ("CHI" for Chitosan, and "PAH" for Polyallylamine hydrochloride).

Usage

batchExperiment

Format

An afmexperiment class consisting on a list of 14 afmdata class elements each one having the following fields:

data

Data frame with the data itself with a variable number of rows (between 4692 and 6142) and 4 variables:

Z

Distance (in meters)

Force

Force (in Newtons)

Time

Time starting at the begining of each segment (in seconds)

Segment

Segment of the Force-distance curve (factor: "approach", "pause", "retract")

params

List with the following fields describing the experiment:

SpringConstant

Cantilever spring constant (in N/m)

curvename

Name of the original AFM data file from which the data was obtained

type

Type of sample covering: "CHI" for Chitosan, and "PAH" for Polyallylamine hydrochloride


[Package afmToolkit version 0.0.1 Index]