Confounder-Adjusted Survival Curves and Cumulative Incidence Functions


[Up] [Top]

Documentation for package ‘adjustedCurves’ version 0.9.1

Help Pages

adjustedCurves-package Confounder-Adjusted Survival Curves and Cumulative Incidence Functions
adjustedcif Calculate Cause-Specific Confounder-Adjusted Cumulative Incidence Functions
adjustedsurv Calculate Confounder-Adjusted Survival Curves
adjusted_curve_diff Calculate the difference between two Confounder-Adjusted Survival Curves or CIFs
adjusted_curve_test Test if there is a difference between two Confounder-Adjusted Survival Curves or CIFs
adjusted_rmst Calculate Confounder-Adjusted Restricted Mean Survival Times
adjusted_rmtl Calculate Confounder-Adjusted Restricted Mean Time Lost
adjusted_surv_quantile Calculate Confounder-Adjusted Survival Time Quantiles
as_ggsurvplot_df Extract a 'data.frame' containing the estimated survival curves from a 'adjustedsurv' object
cif_aalen_johansen Group-Specific Aalen-Johansen CIFs
cif_aiptw Augmented Inverse Probability of Treatment Weighted CIFs
cif_aiptw_pseudo Augmented Inverse Probability of Treatment Weighted CIFs using Pseudo-Values
cif_direct Direct Adjusted Cumulative Incidence Functions
cif_direct_pseudo Direct Adjusted CIFs using Pseudo-Values
cif_iptw Inverse Probability of Treatment Weighted CIFs
cif_iptw_pseudo Inverse Probability of Treatment Weighted CIFs using Pseudo-Values
cif_matching Using Propensity-Score Matching to Calculate Adjusted CIFs
cif_tmle Targeted Maximum Likelihood Estimation for CIFs
CSC_MI Cause-Specific Cox Regression with Multiple Imputation
FGR_MI Fine & Gray Model with Multiple Imputation
models_cif_direct List of supported models in 'cif_direct'
models_surv_direct List of supported models in 'surv_direct'
plot.adjustedcif Plot Confounder-Adjusted Cumulative Incidence Functions
plot.adjustedsurv Plot Confounder-Adjusted Survival Curves
plot.curve_test Plot Method for 'curve_test' Objects
plot_curve_diff Plot the Difference of Two Adjusted Survival Curves or CIFs
plot_rmst_curve Plot Adjusted Restricted Mean Survival Time Curves
plot_rmtl_curve Plot Adjusted Restricted Mean Time Lost Curves
print.curve_test Print Method for 'curve_test' Objects
sim_confounded_crisk Simulate Competing Risks Data with Confounders
sim_confounded_surv Simulate Survival Data with Confounders
surv_aiptw Augmented Inverse Probability of Treatment Weighted Survival Curves
surv_aiptw_pseudo Augmented Inverse Probability of Treatment Weighted Survival Curves using Pseudo-Values
surv_direct Direct Adjusted Survival Curves
surv_direct_pseudo Direct Adjusted Survival Curves using Pseudo-Values
surv_emp_lik Empirical Likelihood Estimation Survival Curves
surv_iptw_cox Inverse Probability of Treatment Weighted Survival using Cox-Regression
surv_iptw_km Inverse Probability of Treatment Weighted Kaplan-Meier estimates
surv_iptw_pseudo Inverse Probability of Treatment Weighted Survival Estimates using Pseudo-Values
surv_km Group-Specific Kaplan-Meier Survival Curves
surv_matching Using Propensity-Score Matching to Calculate Adjusted Survival Curves
surv_ostmle One-Step Targeted Maximum Likelihood Estimation Survival Curves
surv_strat_amato Adjusted Survival Curves for Categorical Confounders using the Method by Amato (1988)
surv_strat_cupples Adjusted Survival Curves for Categorical Confounders using the Method by Cupples et al. (1995)
surv_strat_nieto Adjusted Survival Curves for Categorical Confounders using the Method by Gregory (1988) and Nieto & Coresh (1996)
surv_tmle Targeted Maximum Likelihood Estimation for Adjusted Survival Curves