carni19 {adephylo} | R Documentation |
Phylogeny and quantative trait of carnivora
Description
This data set describes the phylogeny of carnivora as reported by Diniz-Filho et al. (1998). It also gives the body mass of these 19 species.
Format
carni19
is a list containing the 2 following objects :
- tre
is a character string giving the phylogenetic tree in Newick format.
- bm
is a numeric vector which values correspond to the body mass of the 19 species (log scale).
Note
This dataset replaces the former version in ade4.
Source
Diniz-Filho, J. A. F., de Sant'Ana, C.E.R. and Bini, L.M. (1998) An eigenvector method for estimating phylogenetic inertia. Evolution, 52, 1247–1262.
Examples
if(require(ape) && require(phylobase)){
data(carni19)
tre <- read.tree(text=carni19$tre)
x <- phylo4d(tre, data.frame(carni19$bm))
table.phylo4d(x, ratio=.5, center=FALSE)
}
[Package adephylo version 1.1-16 Index]