S1.match-class {adegraphics}R Documentation

Class S1.match

Description

A class for the creation and display of paired scores.

Objects from the Class

S1.match objects can be created by calls of the form new("S1.match", ...).

The regular usage in this package is to use the s1d.match function.

Slots

data

a list containing data or data's name.

trellis.par

a list of parameters for lattice call. It will be passed directly to par.settings arguments of the lattice function.

adeg.par

a list of graphical parameters, corresponding to the ones given by adegpar() function.

lattice.call

a list to create the trellis object.

g.args

a list containing some method parameters linked with the created object of ADEg.S1 class.

stats

a list of internal preliminary calculations

s.misc

a list of some others internal parameters. The specific slot for S1.match objects is:

Call

an object of class call

Extends

Class ADEg.S1, directly.
Class ADEg, by class ADEg.S1, distance 2.
Class ADEgORtrellis, by class ADEg.S1, distance 3.
Class ADEgORADEgSORtrellis, by class ADEg.S1, distance 3.

Methods

The methods of the father classes "ADEg.S1" and "ADEg" can be used by inheritance. The specific methods for S1.match are:

prepare

signature(object = "S1.match"): calls the parent method (prepare for ADEg.S1) and modifies some graphical parameters used by default.

panel

signature(object = "S1.match"): draws score points and matching segments and labels.

Author(s)

Alice Julien-Laferriere, Aurelie Siberchicot aurelie.siberchicot@univ-lyon1.fr and Stephane Dray

See Also

ADEg ADEg.S1 s1d.match

Examples

showClass("S1.match")

[Package adegraphics version 1.0-15 Index]