AntibioticSmall {adaptiveGPCA}

A subset of the antibiotic data

Description

This is a smaller version of the AntibioticPhyloseq dataset, for use in the examples so that the running time isn't so long. It has the same samples and a randomly selected set of 200 of the taxa. It is stored as a list with three components: the normalized OTU abundances (X), the similarity matrix for the taxa (Q), and the diagonal weight matrix (D, the identity matrix).

Format

A list with three components.