apply_amplification_efficiency {WES}

Apply PCR amplification efficiency estimation to a data.frame

Description

This function applies the est_amplification_efficiency() function to a data.frame object which follows the standardized format shown in the template_WES_standard_curve data set.

Usage

apply_amplification_efficiency(standard_curves)

Arguments

standard_curves

A data.frame giving the target name, serial diluted concentration of target nucleic acid, and Ct value from a standard curve assay. Must follow the template_WES_standard_curve standardized format.

Value

A data.frame containing the mean, and low and high of the 95% confidence interval of the percentile amplification efficiency for each target name.

Examples

apply_amplification_efficiency(template_WES_standard_curve)