vSep {VDAP} | R Documentation |
Select Peptides of a Particular Length/Charge Combination
Description
Select Peptides that have a specified length/charge combination, a subfunction
for lcScan
, and all methods of LCMotif
and LcComp
Usage
vSep(File, Length = NULL, Charge = NULL)
Arguments
File |
An R object, usually a |
Length |
An |
Charge |
An |
Value
Returns a data.frame
with peptides of the selected Length/Charge
combination.
Author(s)
Cody Moore
Examples
protExChargeSep <- data.frame(Peptides = c("PWRGPWARVGSG","GYNRVGQGSG","PWRGPWARVGSG"),
Length = c(12,10,12), Charge = c(2,1,2))
## Length/Charge Combination ##
hitSelEx <- vSep(protExChargeSep,10,1)
## Charge only ##
hitSelEx <- vSep(protExChargeSep,Charge = 1)
## Length Only ##
hitSelEx <- vSep(protExChargeSep,Length = 12)
[Package VDAP version 2.0.0 Index]