getSamplingTimeDist {TransPhylo} | R Documentation |
Extract and return realised sampling time distribution
Description
Extract and return realised sampling time distribution
Usage
getSamplingTimeDist(
record,
burnin = 0.5,
maxi = 2,
numBins = 20,
show.plot = F
)
Arguments
record |
MCMC output produced by inferTTree |
burnin |
Proportion of the MCMC output to be discarded as burnin |
maxi |
Maximum generation time to consider |
numBins |
Number of time bins to compute and display distribution |
show.plot |
Show a barplot of the distribution |
Value
Vector of times between becoming infected and becoming sampled in the posterior
[Package TransPhylo version 1.4.5 Index]