TRD-package |
Transmission Ratio Distortion |
find.maf |
Find minor allele frequency (MAF) in case-trios, control-trios, or the whole sample. |
find.t |
Find transmission ratio of minor alleles in mother, father or both parents. |
gcount |
Calculate genotype counts (additive model) for selected population. |
ll |
Fit Loglinear model with and without adjustment for TRD. |
prev |
Calculate theoretical prevalence of disease |
rtrios |
Generate simulated popoulation of case- and control-trios |
strata.cnt |
Count trios for each of the 15/16 strata with mother-father-child genotypes MFC |
tdt |
Compute TDT and adjusted TDT on case- and/or control-trios |
TRD |
Transmission Ratio Distortion |