spatialGEV_sample {SpatialGEV} | R Documentation |
Get posterior parameter draws from a fitted GEV-GP model.
Description
Get posterior parameter draws from a fitted GEV-GP model.
Usage
spatialGEV_sample(model, n_draw, observation = FALSE, loc_ind = NULL)
Arguments
model |
A fitted spatial GEV model object of class |
n_draw |
Number of draws from the posterior distribution |
observation |
whether to draw from the posterior distribution of the GEV observation? |
loc_ind |
A vector of location indices to sample from. Default is all locations. |
Value
An object of class spatialGEVsam
, which is a list with the following elements:
parameter_draws
A matrix of joint posterior draws for the hyperparameters and the random effects at the
loc_ind
locations.y_draws
If
observation == TRUE
, a matrix of corresponding draws from the posterior predictive GEV distribution at theloc_ind
locations.
Examples
library(SpatialGEV)
n_loc <- 20
a <- simulatedData$a[1:n_loc]
logb <- simulatedData$logb[1:n_loc]
logs <- simulatedData$logs[1:n_loc]
y <- simulatedData$y[1:n_loc]
locs <- simulatedData$locs[1:n_loc,]
beta_a <- mean(a); beta_b <- mean(logb)
fit <- spatialGEV_fit(
data = y,
locs = locs,
random = "ab",
init_param = list(
beta_a = beta_a,
beta_b = beta_b,
a = rep(0, n_loc),
log_b = rep(0, n_loc),
s = 0,
log_sigma_a = 0,
log_kappa_a = 0,
log_sigma_b = 0,
log_kappa_b = 0
),
reparam_s = "positive",
kernel = "spde",
silent = TRUE
)
loc_ind <- sample(n_loc, 5)
sam <- spatialGEV_sample(model=fit, n_draw=100,
observation=TRUE, loc_ind=loc_ind)
print(sam)
summary(sam)
[Package SpatialGEV version 1.0.1 Index]