subset.Motif {Signac}

Subset a Motif object

Description

Returns a subset of a Motif-class object.

Usage

## S3 method for class 'Motif'
subset(x, features = NULL, motifs = NULL, ...)

## S3 method for class 'Motif'
x[i, j, ...]

Arguments

x

A Motif object

features

Which features to retain

motifs

Which motifs to retain

...

Arguments passed to other methods

i

Which columns to retain

j

Which rows to retain

Value

Returns a subsetted Motif object

See Also

subset

Examples

motif.obj <- SeuratObject::GetAssayData(
  object = atac_small[['peaks']], slot = "motifs"
)
subset(x = motif.obj, features = head(rownames(motif.obj), 10))
motif.obj <- SeuratObject::GetAssayData(
  object = atac_small, assay = 'peaks', slot = 'motifs'
)
motif.obj[1:10,1:10]