granges-methods {Signac}R Documentation

Access genomic ranges for ChromatinAssay objects

Description

Methods for accessing GRanges object information stored in a ChromatinAssay object.

Usage

## S4 method for signature 'ChromatinAssay'
granges(x, use.names = TRUE, use.mcols = FALSE, ...)

## S4 method for signature 'Seurat'
granges(x, use.names = TRUE, use.mcols = FALSE, ...)

Arguments

x

A ChromatinAssay object

use.names

Whether the names on the genomic ranges should be propagated to the returned object.

use.mcols

Not supported for ChromatinAssay objects

...

Additional arguments

Value

Returns a GRanges object

Functions

See Also

Examples

granges(atac_small)

[Package Signac version 1.13.0 Index]