| MotifPlot {Signac} | R Documentation |
Plot DNA sequence motif
Description
Plot position weight matrix or position frequency matrix for different DNA sequence motifs.
Usage
MotifPlot(object, motifs, assay = NULL, use.names = TRUE, ...)
Arguments
object |
A Seurat object |
motifs |
A list of motif IDs or motif names to plot |
assay |
Name of the assay to use |
use.names |
Use motif names stored in the motif object |
... |
Additional parameters passed to |
Value
Returns a ggplot object
Examples
motif.obj <- Motifs(atac_small)
MotifPlot(atac_small, motifs = head(colnames(motif.obj)))
[Package Signac version 1.13.0 Index]