q-values {SeqFeatR} | R Documentation |
Calculate q-values from p-values
Description
Calculates and adds a column of q-values to a list of given p-values.
Usage
qvalues(path_to_file_csv = NULL, save_name_csv)
Arguments
path_to_file_csv |
file with a column with p-values. Has to contain a column called "p_value" (without the double quotes). For reference see example file. |
save_name_csv |
name of file to which results are saved in csv format. |
Details
Takes a csv file with a column which is called 'p_values' and uses the qvalues package to calculate from this column the corresponding q-values.
Author(s)
Bettina Budeus
Examples
#Input file
file_input <- system.file("extdata", "assocpair_results.csv", package="SeqFeatR")
#Usage
qvalues(
path_to_file_csv=file_input,
save_name_csv="q-values_result.csv")
[Package SeqFeatR version 0.3.1 Index]