plot_seeds {SeedMatchR} | R Documentation |
Plot the Guide Strand with different optional seeds
Description
Plot the Guide Strand with different optional seeds
Usage
plot_seeds(guide.seq)
Arguments
guide.seq |
Guide a.k.a anti-sense sequence oriented 5' > 3'. Sequence must be greater than 8 bp. |
Value
A msaggplot of the guide sequence in addition to the available seed sequences
Examples
library(msa)
# Ttr siRNA sequence
guide.seq = "UUAUAGAGCAAGAACACUGUUUU"
# generate seed plot
plotted.seeds = plot_seeds(guide.seq)
[Package SeedMatchR version 1.1.1 Index]